directories.md

@@ -9,15 +9,16 @@ The next directories are analysis, remote_archive and remote work. Analysis cont
 # Data  
 **0_raw:** Your raw data files and location files will be placed here, they will have a extension such as .bdf. These files are loaded into the *init* script.  
 **1_init:** Your data files will go here after they have been initialled and are have the .set/.fdt extension. These files are loaded into the *scalpart* script.  
-**2_preproc:**  All of the processing files created by the rest of the pipeline will be saved into this folder. The final file from the main pipeline is the *_comp* file. This file then goes into *dipfit* for the final local part.   
+**2_preproc:**  All of the processed files created by the pipeline will be saved into this folder. The final file from the main pipeline is the *_comp* file. This file then goes into *dipfit* for the final local part.   
 **3_check:** The pipeline does not automatically save any files into this folder, but it is useful to store files after they have been visually inspected and are ready for analysis.  
 **4_study:** The pipeline does not automatically save any files into this folder, but it is useful to store files that are included in your study.
 
 # Logs
-Logs is automatically populated with scripts when you execute the pipeline. You will see a folder generated for every script. These folders contain:
-* A specific .m file for each subject data file.
-* A specific .err file for each subject if an error occurred
-* A specific  .log file that records rhe remote system command
+Logs is automatically populated with scripts when you execute the pipeline. You will see a folder generated for every script identified by the script that was run followed by the date and time of the scripts execution. These folders contain:
+* A specific **.m** file for each subject data file.
+* A specific **.err** file for each subject if an error occurred
+* A specific  **.log** file that records the remote system command window
+* A single **.sh** submit script that contains the job commands that were sent to the remote servers. (Remote Jobs Only)
 
 
 # Support