directories.md

@@ -16,18 +16,17 @@ The next directories are analysis, remote_archive and remote work. Analysis cont
 # Logs
 Logs is automatically populated with scripts when you execute the pipeline. You will see a folder generated for every script identified by the script that was run followed by the date and time of the scripts execution. These folders contain:
 * A specific **.m** file for each subject data file.  
-* A specific **.err** file for each subject if an error occurred
-* A specific  **.log** file that records the remote system command window
+* A specific **.err** file for each subject if an error occurred.
+* A specific  **.log** file for each subject that records the remote system command window.    
 * A single **.sh** submit script that contains the job commands that were sent to the remote servers. (Remote Jobs Only)  
 
-
 # Support
-**Config**
+**Config** This folder contains all of the configuration files that are needed for the EEGLAB plugins. Configuration files will have a **.cfg** or **.txt** extension.  
 
-**Dependencies/eeglabs**
+**Dependencies/eeglabs** This folder will contain the correct [BUCANL EEGLAB](https://git.sharcnet.ca/bucanl_eeglab/eeglab_asr_amica) version to support this pipeline. You can check to see the exact version by following the instructions in [Version Control](https://git.sharcnet.ca/bucanl_pipelines/eeg_pipe_asr_amica/wikis/updates-and-git-version-control).  
 
-**Misc** 
+**Misc** This folder contains a bunch of miscellaneous support pieces such amica parameter files, and EEG location models.  
 
-**Scripts**
+**Scripts** This folder contains all of the [Script Files](https://git.sharcnet.ca/bucanl_pipelines/eeg_pipe_asr_amica/wikis/pipeline-scripts) that make up process behind the pipeline. These have the extension **.htb** and are called history Batch Files as they are executed with the *batch_context* extension.
 
 [ :house: **Return to Main Page**](https://git.sharcnet.ca/bucanl_pipelines/eeg_pipe_asr_amica/wikis/home)
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