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changes to regepoch and con2epoch to drop less than 1 sec when epoching

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Merged Andrew Lofts requested to merge epochfix into master Dec 01, 2016
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The latest work, seems to be working fine atm, i will test by running the whole pipe to see if it trips up at all. Most files will be no loss, other types might lose up to 1 sec, will try some of these to, to find any mismatches.

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Source branch: epochfix