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**Note:** When debugging errors this is the most important folder as you can see what is happening by using these four files.
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## bids/derivatives/lossless/code
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code
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This folder contains the body of the pipeline and houses all scripts and configurations.
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# Support <a name="support"></a>
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**Config** This folder contains all of the configuration files and init files that are needed for the EEGLAB plugins. Configuration files will have a **.cfg** or **.txt** extension. The naming of each configuration file should mirror the script that it goes with.
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|**Filename**|**Explanation**|
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|-------------|-------------|
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|config|This folder contains all of the configuration files and init files that are needed for the EEGLAB plugins. Configuration files will have a **.cfg** or **.txt** extension. The naming of each configuration file should mirror the script that it goes with.|
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|dependencies|Contains packages that the pipeline are dependent on. All folders within should be their own git repository, with their own documentation.|
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|misc|Miscellaneous support pieces such amica parameter files, EEG location models, and event renaming files are stored here.|
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|scripts|Folder containing all of the script files that make up processes behind the pipeline. These have the extension **.htb** and are called **H**istory **T**emplate **B**atch as they are executed in the *batch_context* extensions.|
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|tools|Various script files to be used as in-house optimizers or cleanup scripts for remotes.|
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*Note: Excluded files at this level are git repository specific and have no actual effect on the pipeline*
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**Dependencies/eeglab:** This folder will contain the correct [BUCANL EEGLAB](https://git.sharcnet.ca/bucanl_eeglab/eeglab_asr_amica) version to support this pipeline. You can check to see the exact version by following the instructions in [Version Control](https://git.sharcnet.ca/bucanl_pipelines/bids_lossless_eeg/wikis/updates-and-git-version-control).
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**Misc:** This folder contains a bunch of miscellaneous support pieces such amica parameter files, EEG location models, and event renaming files.
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**Scripts:** This folder contains all of the [Script Files](https://git.sharcnet.ca/bucanl_pipelines/bids_lossless_eeg/wikis/pipeline-scripts) that make up process behind the pipeline. These have the extension **.htb** and are called **H**istory **T**emplate **B**atch as they are executed in the *batch_context* extension.
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***
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It is important to note that the folder design is built into pipeline, and in order for it to run smoothly the directory structure should not be changed without carefully consulting each part of the pipeline.
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