@@ -17,7 +17,19 @@ remote server addresses and facilitates working with a remote environments.
* Provides simple front end to researchers to code written by programmers to submit data files to be processed in parallel
* Share and save configurations that are submitted with each job
## Tutorial
If you wish to make your own pipeline we suggest you use the tutorial below as guidance. The [bucanl ICA pipeline](https://git.sharcnet.ca/bucanl_pipelines/eeg_pipe_asr_amica) is a practical examples but is very complex and may be hard to understand due to complex interactions.
*[Creating a Context Configuration File](tutorial-creating-a-context-configuration-file)
*[Running your job locally](tutorial-running-locally)
*[Running your job remotely](tutorial-running-remotely)
**Batch Context Main Components**
*[Script Files](script-files)
*[Configuration Files](configuration-files)
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@@ -27,12 +39,6 @@ remote server addresses and facilitates working with a remote environments.
*[Adv. String Swapping Techniques](adv-str-swap)
*[Contributing and Contacting Us](contributing)
# Tutorials and Best Practice
There are three symbols that you should keep an eye out for in this documentation:
* :so: These stars highlight our recommended **Best Practices**.
* :b: The letter B indicates an **Example** based off of the BUCANL Pipeline Tutorials.
* :warning: This warning indicates when you have to **Change a Tutorial File** if you are using one of the EEG_pipe packages
***
* :floppy_disk: Please note that whenever you make a change to a GUI(Graphic User Interface) field box, you must click off of it so that the field box is **not** highlighted, for EEGLAB to record your change.
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@@ -46,10 +52,6 @@ Running a successful job using batch context consists of 5 main components:
All of these components will need to be selected and/or loaded into the main batch context user interface before the batch can be executed. Running your data files in a batch is an effective way to execute scripted pipelines, modules or procedures on large sets of data files.
:so: Download the [Tutorial Pipeline](tutorials) and work your way through the wiki pages. If you want to get right to running a job go to [Running scripts](running-scripts) and use :b: provided files.
