bk12fy created page: tutorial completed pipeline authored by James Desjardins's avatar James Desjardins
...@@ -10,12 +10,12 @@ remote server addresses and facilitates working with a remote environments. ...@@ -10,12 +10,12 @@ remote server addresses and facilitates working with a remote environments.
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## Benefits ## Benefits
* Provides a simple front end interface for researchers to batch process scripted analysis pipelines on multiple data files
* Save script and configuration files that contain everything that is required to replicate an analysis pipeline across data files or studies
* Run jobs on clusters in highly parallel environments
* Interact with different cluster schedulers in a portable way * Interact with different cluster schedulers in a portable way
* Write your own adapters for your own custom schedulers in a contained way * Write your own adapters for your own custom schedulers in a contained way
* Run jobs on clusters in a highly parallel environments * Submit jobs with dynamic resource parameters that optimize resource allocation leading to lower queue times in competitive resource allocations
* Submit jobs with dynamic resource parameters that optimize resource allocation leading to lower queue times in competitive resource allocations.
* Provides simple front end to researchers to code written by programmers to submit data files to be processed in parallel
* Share and save configurations that are submitted with each job
## Tutorial ## Tutorial
If you wish to make your own pipeline we suggest you use the tutorial below as guidance. The [bucanl ICA pipeline](https://git.sharcnet.ca/bucanl_pipelines/eeg_pipe_asr_amica) is a practical example but is very complex and may be hard to understand due to complex interactions. If you wish to make your own pipeline we suggest you use the tutorial below as guidance. The [bucanl ICA pipeline](https://git.sharcnet.ca/bucanl_pipelines/eeg_pipe_asr_amica) is a practical example but is very complex and may be hard to understand due to complex interactions.
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